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Intron Name: Anas_platyrhynchos_platyrhynchos_29_552691_553308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

552691 - 553308

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CAAATCTCATCT

Flanking Amino Acid:

HESSSLLQHEGKQEP*

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.2

0.68

0.8

73.2

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

45.8

-0.2

1.8

58.83

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012159

550762 - 553470

2709