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Intron Name: Anas_platyrhynchos_platyrhynchos_29_638809_666289_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
638809 - 666289

Intron Length:
27481

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGCAGA

5'SS Class:
major

3'SS Sequence:
TGCATTTTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTGCAT

U12 Branch Point Sequence:
CTTTCTTGCATT

Flanking Amino Acid:
SPGVTGGTVGGPFFLLK*

Intron Amino Acid Position:
1515

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
68.9
43.8

Major BPS
62.7
0.32
1.4
75
39.9

Major PPT
76.6
0.6
0.9
68.5
42

Minor 5ss
37.4
-1.4
3.1
48.6
47.2

Minor BPS
54.1
0.21
1.9
76.06
41.4

Associated Gene:

Gene:
DOT1L

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

638786 - 710408
71623