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Intron Name: Anas_platyrhynchos_platyrhynchos_29_643845_645602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

643845 - 645602

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

TTATCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATCC

Flanking Amino Acid:

TKEEENVFSISFIEEPERKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

71.6

34.4

Major BPS

78.8

0.72

67.9

40.1

Major PPT

69.5

0.44

1.1

65.7

40.7

Minor 5ss

39.6

-1.2

2.9

56.3

41.9

Minor BPS

82.4

1.4

90.52

30.4

Associated Gene:

Gene:

PLEKHJ1

Ensembl Gene ID:

ENSAPLG00000010955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027938

638009 - 646714

8706

ENSAPLT00000011404

642020 - 647714

5695