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Intron Name: Anas_platyrhynchos_platyrhynchos_29_645694_645901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

645694 - 645901

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGA

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

CCTTTCTTACAG

Flanking Amino Acid:

QEWIEALKRASYEFMRRSLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

65.9

42.7

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

88.3

0.86

0.7

83.2

25.4

Minor 5ss

41.8

-0.9

3.2

55.7

48.5

Minor BPS

49.9

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

PLEKHJ1

Ensembl Gene ID:

ENSAPLG00000010955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027938

638009 - 646714

8706

ENSAPLT00000011404

642020 - 647714

5695