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Intron Name: Anas_platyrhynchos_platyrhynchos_29_645966_646648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

645966 - 646648

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

CTGTGTCTGACT

Flanking Amino Acid:

RNEIQKMTGKDPLEQYGISE

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

63.7

0.34

1.2

41.8

Major PPT

71.2

0.48

0.9

65.5

36.1

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

46.9

-0.1

2.1

67.05

44.4

Associated Gene:

Gene:

PLEKHJ1

Ensembl Gene ID:

ENSAPLG00000010955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027938

638009 - 646714

8706

ENSAPLT00000011404

642020 - 647714

5695