Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_672921_673715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

672921 - 673715

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTTACA

Flanking Amino Acid:

PAALPIAGEKGLRERTSVSN

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

83.5

0.75

0.8

76.9

36.3

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

58.7

0.27

76.76

39.9

Associated Gene:

Gene:

DOT1L

Ensembl Gene ID:

ENSAPLG00000009414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045499

660985 - 715812

54828

ENSAPLT00000042708

660985 - 715812

54828

ENSAPLT00000009872

638786 - 710408

71623