Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_681986_682684_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

681986 - 682684

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACTGT

5'SS Class:

major

3'SS Sequence:

AAAAATCTCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGGCTTTTAAAA

Flanking Amino Acid:

TTPTKVQENKDSGAEEEKAG

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

68.2

39.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

56.8

0.15

42.4

Minor 5ss

39.5

-1.2

3.2

55.9

48.3

Minor BPS

56.7

0.21

1.4

62.33

37.6

Associated Gene:

Gene:

DOT1L

Ensembl Gene ID:

ENSAPLG00000009414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045499

660985 - 715812

54828

ENSAPLT00000042708

660985 - 715812

54828

ENSAPLT00000009872

638786 - 710408

71623