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Intron Name: Anas_platyrhynchos_platyrhynchos_29_684150_684963_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
684150 - 684963

Intron Length:
814

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATA|GTGAGTATA

5'SS Class:
major

3'SS Sequence:
TTTGTATTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGTAT

U12 Branch Point Sequence:
TCTGTCGCAACT

Flanking Amino Acid:
YYLHTIDRTILENYFSSLKN

Intron Amino Acid Position:
292

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
0.9
78.7
29.9

Major BPS
71.5
0.53
1.4
71.7
44.6

Major PPT
86.8
0.83
0.8
81.4
35.2

Minor 5ss
35.7
-1.6
2.9
44
38.6

Minor BPS
47.5
-0.1
2.3
71.07
46.1

Associated Gene:

Gene:
DOT1L

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

660985 - 715812
54828

660985 - 715812
54828

638786 - 710408
71623