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Intron Name: Anas_platyrhynchos_platyrhynchos_29_689320_691985_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
689320 - 691985

Intron Length:
2666

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGTAC

5'SS Class:
major

3'SS Sequence:
CATTGTCTTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
TGTTTATTAACT

Flanking Amino Acid:
EEWRERIANTSVIFVNNFAF

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
63.5
37.6

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
79.9
0.67
0.9
73.2
36.9

Minor 5ss
35.3
-1.7
3.5
49.3
47.2

Minor BPS
75
0.86
1.5
89.88
33.6

Associated Gene:

Gene:
DOT1L

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

660985 - 715812
54828

660985 - 715812
54828

638786 - 710408
71623