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Intron Name: Anas_platyrhynchos_platyrhynchos_29_710374_712870_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
710374 - 712870

Intron Length:
2497

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTCTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTGTTTTTATTC

Flanking Amino Acid:
DAAHEIIETIRWVCEEIPDL

Intron Amino Acid Position:
56

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.9
85.6
31.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
91.9
0.94
0.6
84.9
30

Minor 5ss
39.1
-1.2
3.4
59
45.5

Minor BPS
60.6
0.31
1.5
68.94
37.7

Associated Gene:

Gene:
DOT1L

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

660985 - 715812
54828

660985 - 715812
54828