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Intron Name: Anas_platyrhynchos_platyrhynchos_29_843418_846863_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

843418 - 846863

Intron Length:

3446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCAGGAC

5'SS Class:

weak_major

3'SS Sequence:

TCTTCATTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTCATTACTA

Flanking Amino Acid:

MRGFSLVQARLFDEPQLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

38.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.3

0.52

0.9

67.4

38.1

Minor 5ss

24.2

-3

3.4

32.4

42.6

Minor BPS

0.28

1.9

72.1

40.4

Associated Gene:

Gene:

BTBD2

Ensembl Gene ID:

ENSAPLG00000010930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021089

842945 - 854717

11773

ENSAPLT00000011377

843317 - 855717

12401