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Intron Name: Anas_platyrhynchos_platyrhynchos_29_846970_847765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

846970 - 847765

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAA

U12 Branch Point Sequence:

AGTGCCTAAAGT

Flanking Amino Acid:

NAEGFTDIDLDTLVAVLERD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

85.2

32.2

Major BPS

0.12

1.2

57.8

37.4

Major PPT

79.3

0.66

0.8

72.7

32.1

Minor 5ss

42.3

-0.9

3.5

64.1

47.4

Minor BPS

50.4

0.09

2.1

70.74

Associated Gene:

Gene:

BTBD2

Ensembl Gene ID:

ENSAPLG00000010930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038788

842717 - 854717

12001

ENSAPLT00000021089

842945 - 854717

11773

ENSAPLT00000011377

843317 - 855717

12401