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Intron Name: Anas_platyrhynchos_platyrhynchos_29_847964_850796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

847964 - 850796

Intron Length:

2833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

GAGGGCTGACCA

Flanking Amino Acid:

PLMTIEEFAAGPAQSGILTD

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

73.5

0.58

73.6

32.5

Major PPT

82.2

0.72

0.8

76.8

31.9

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

40.4

-0.7

2.1

45.83

43.2

Associated Gene:

Gene:

BTBD2

Ensembl Gene ID:

ENSAPLG00000010930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011377

843317 - 855717

12401

ENSAPLT00000038788

842717 - 854717

12001

ENSAPLT00000021089

842945 - 854717

11773