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Intron Name: Anas_platyrhynchos_platyrhynchos_29_850990_852725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

850990 - 852725

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTTC

5'SS Class:

major

3'SS Sequence:

TCTATTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

CTTTCGTCATCT

Flanking Amino Acid:

WGYSGTSDRIRFSVNKRIFV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

73.2

39.3

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

83.1

0.74

0.8

77.4

31.2

Minor 5ss

43.8

-0.7

2.9

59.3

45.4

Minor BPS

48.3

-0

2.5

75.91

46.6

Associated Gene:

Gene:

BTBD2

Ensembl Gene ID:

ENSAPLG00000010930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038788

842717 - 854717

12001

ENSAPLT00000021089

842945 - 854717

11773

ENSAPLT00000011377

843317 - 855717

12401