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Intron Name: Anas_platyrhynchos_platyrhynchos_29_87494_89044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87494 - 89044

Intron Length:

1551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CACCTGCTAACG

Flanking Amino Acid:

LPRHSSLLTQYGSLFESYTE

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.2

43.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

46.2

-0.4

2.8

59.8

Minor BPS

40.1

-0.8

2.2

41.87

42.8

Associated Gene:

Gene:

NRTN

Ensembl Gene ID:

ENSAPLG00000027910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030223

85871 - 89564

3694