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Intron Name: Anas_platyrhynchos_platyrhynchos_29_900878_901826_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

900878 - 901826

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCACTCCGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCTTGTTTCACT

Flanking Amino Acid:

AVTMLICILRVHKIYRGAGG

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

70.4

38.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

66.6

0.37

0.9

66.5

35.6

Minor 5ss

33.5

-1.9

3.5

41.3

45.2

Minor BPS

0.27

2.2

78.9

Associated Gene:

Gene:

SCAMP4

Ensembl Gene ID:

ENSAPLG00000011434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033493

900660 - 909658

8999

ENSAPLT00000011912

898853 - 906424

7572