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Intron Name: Anas_platyrhynchos_platyrhynchos_29_901945_902967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

901945 - 902967

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AGAGCAGTAATG

Flanking Amino Acid:

QAIGFSGWGACGWLAAITFF

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

76.8

0.67

40.9

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

41.4

-0.7

2.2

44.49

41.5

Associated Gene:

Gene:

SCAMP4

Ensembl Gene ID:

ENSAPLG00000011434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033493

900660 - 909658

8999

ENSAPLT00000011912

898853 - 906424

7572