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Intron Name: Anas_platyrhynchos_platyrhynchos_29_903070_906191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

903070 - 906191

Intron Length:

3122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GTCCTCCTAACT

Flanking Amino Acid:

CWFRPAYKAFRSDSSFNFMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

72.7

38.8

Major BPS

0.55

71.8

31.4

Major PPT

85.5

0.8

0.7

25.3

Minor 5ss

32.5

-2

3.2

40.9

45.3

Minor BPS

58.3

0.34

1.7

74.74

41.6

Associated Gene:

Gene:

SCAMP4

Ensembl Gene ID:

ENSAPLG00000011434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033493

900660 - 909658

8999

ENSAPLT00000011912

898853 - 906424

7572