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Intron Name: Anas_platyrhynchos_platyrhynchos_29_906349_909408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

906349 - 909408

Intron Length:

3060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GCTCTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAC

U12 Branch Point Sequence:

GCTCTCTTTACA

Flanking Amino Acid:

LVKRIYHVWIFYCITLVVNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

66.1

0.4

1.1

69.1

37.9

Major PPT

82.2

0.73

0.8

75.6

32.9

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

57.4

0.23

1.6

65.19

40.7

Associated Gene:

Gene:

SCAMP4

Ensembl Gene ID:

ENSAPLG00000011434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033493

900660 - 909658

8999