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Intron Name: Anas_platyrhynchos_platyrhynchos_29_949071_949778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

949071 - 949778

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

CAAATGCTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TTCGTTGCAAAT

Flanking Amino Acid:

GDSTPEDVKASAQTPVTHQM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

61.3

0.26

50.4

43.3

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

41.2

-0.5

2.2

60.04

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025690

946599 - 954762

8164