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Intron Name: Anas_platyrhynchos_platyrhynchos_29_986508_989647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

986508 - 989647

Intron Length:

3140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

GTCTGTTCAATT

Flanking Amino Acid:

TEDKGRLGKQLSKEEVSEEK

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

49.4

0.04

68.3

43.3

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337