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Intron Name: Anas_platyrhynchos_platyrhynchos_29_989750_992288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

989750 - 992288

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAA

U12 Branch Point Sequence:

GCTGTAGAAACC

Flanking Amino Acid:

RISHLVKQGNAEVPSKPVVR

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

81.5

0.71

0.9

77.1

37.1

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

37.6

-0.9

2.3

46.91

42.6

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337