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Intron Name: Anas_platyrhynchos_platyrhynchos_2_100994475_100996610_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
100994475 - 100996610

Intron Length:
2136

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTCA

5'SS Class:
major

3'SS Sequence:
AATTATCTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TGTACAAAAATT

Flanking Amino Acid:
NSRFTVKDNQDNTAGIFTAK

Intron Amino Acid Position:
532

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70
0.47
1.1
62.3
38.7

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
72.8
0.51
0.9
63.5
42.8

Minor 5ss
36
-1.6
3.4
48.5
47.2

Minor BPS
45
-0.3
2.1
67.97
42.5

Associated Gene:

Gene:
CDH19

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

100895953 - 101002820
106868