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Intron Name: Anas_platyrhynchos_platyrhynchos_2_101344249_101354326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101344249 - 101354326

Intron Length:

10078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTACCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATAATTTTACCT

Flanking Amino Acid:

TQEGIITIQKELDFEAKTSY

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

74.1

0.54

0.9

69.2

36.9

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

55.1

0.24

1.6

71.29

39.8

Associated Gene:

Gene:

CDH7

Ensembl Gene ID:

ENSAPLG00000006282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036702

101329118 - 101398468

69351

ENSAPLT00000006551

101321191 - 101405532

84342