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Intron Name: Anas_platyrhynchos_platyrhynchos_2_101367587_101398096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101367587 - 101398096

Intron Length:

30510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CTCTCATCAATT

Flanking Amino Acid:

MGTDPLYVGKLHSDVDKGDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

74.7

0.56

67.8

42.6

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

55.4

0.25

1.9

73.15

Associated Gene:

Gene:

CDH7

Ensembl Gene ID:

ENSAPLG00000006282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036702

101329118 - 101398468

69351

ENSAPLT00000006551

101321191 - 101405532

84342