Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_102365309_102365912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102365309 - 102365912

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTCTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTGTTTATATCT

Flanking Amino Acid:

IGTTPNSFELVKRLEASETN

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

87.5

0.84

0.6

84.2

23.8

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

0.17

1.9

75.93

41.2

Associated Gene:

Gene:

RNMT

Ensembl Gene ID:

ENSAPLG00000006690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006947

102357167 - 102372702

15536