Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_102719711_102721105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102719711 - 102721105

Intron Length:

1395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATTTA

5'SS Class:

major

3'SS Sequence:

CTTGTTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

ACTTCTGCAAAA

Flanking Amino Acid:

GTLEAHGKEKVALIFLPRQD

Intron Amino Acid Position:

1734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

77.6

33.4

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

74.8

0.56

72.9

37.4

Minor 5ss

42.1

-0.9

3.2

58.2

46.4

Minor BPS

45.3

-0.3

2.2

58.91

Associated Gene:

Gene:

CEP192

Ensembl Gene ID:

ENSAPLG00000005988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006273

102709073 - 102761233

52161