Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_102744137_102745063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102744137 - 102745063

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

ATTTTGTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATACATTAAAA

Flanking Amino Acid:

FVPIRLIINANAVAWRCFTF

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.5

0.42

1.2

45.2

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

56.4

0.2

1.7

67.18

37.9

Associated Gene:

Gene:

CEP192

Ensembl Gene ID:

ENSAPLG00000005988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006273

102709073 - 102761233

52161