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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102758552_102760432_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
102758552 - 102760432

Intron Length:
1881

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTATGTAAT

5'SS Class:
major

3'SS Sequence:
TTCTGGTTTTAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CTTGTTTTAATT

Flanking Amino Acid:
DKIDEDFITGSEAAAMIAQD

Intron Amino Acid Position:
122

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1
81.7
31.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
71.6
0.49
1.1
74.8
39.1

Minor 5ss
45.9
-0.4
2.6
64
40.7

Minor BPS
67.3
0.62
1.4
78.3
39.3

Associated Gene:

Gene:
CEP192

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

102709073 - 102761233
52161