Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_102774986_102778114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102774986 - 102778114

Intron Length:

3129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CCTGTCTTAATT

Flanking Amino Acid:

QNSLNGSSASRYFFPPLDSP

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.1

37.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.8

0.67

77.2

41.6

Minor 5ss

41.8

-0.9

3.2

54.8

49.4

Minor BPS

66.3

0.59

1.4

74.4

43.5

Associated Gene:

Gene:

SEH1L

Ensembl Gene ID:

ENSAPLG00000005978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006184

102774796 - 102786669

11874