Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_102776976_102778118_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

102776976 - 102778118

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAGGTAGG

5'SS Class:

major

3'SS Sequence:

TCATGTTGGCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

TTCTCTTGCAAT

Flanking Amino Acid:

LQNSLNGSSAKLHKHSC*

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.4

61.2

43.4

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

46.5

-0.2

1.8

49.7

47.8

Minor 5ss

25.6

-2.8

3.9

Minor BPS

49.3

0.03

73.72

43.2

Associated Gene:

Gene:

SEH1L

Ensembl Gene ID:

ENSAPLG00000005978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043661

102776953 - 102786669

9717