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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102780673_102781920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102780673 - 102781920

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

SCSCISWNPSSSRAHSPMIA

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

82.1

34.6

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

SEH1L

Ensembl Gene ID:

ENSAPLG00000005978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042980

102778111 - 102786669

8559

ENSAPLT00000006184

102774796 - 102786669

11874

ENSAPLT00000043661

102776953 - 102786669

9717