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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102806634_102807248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102806634 - 102807248

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

AGGCTAATAGTT

Flanking Amino Acid:

RGKTLLLQAKEEFTGYDFEN

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

-0.7

1.8

50.68

36.8

Associated Gene:

Gene:

TTC39C

Ensembl Gene ID:

ENSAPLG00000010437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030146

102806544 - 102833593

27050

ENSAPLT00000010880

102806417 - 102844386

37970