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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102809891_102810815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102809891 - 102810815

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTGTATA

Flanking Amino Acid:

CLGNSEDAVQFFQRAAKDEL

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.74

0.8

80.1

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

48.3

-0.1

1.7

64.75

Associated Gene:

Gene:

TTC39C

Ensembl Gene ID:

ENSAPLG00000010437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030146

102806544 - 102833593

27050

ENSAPLT00000010880

102806417 - 102844386

37970