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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102814886_102815777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102814886 - 102815777

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTCACGTTAAAT

Flanking Amino Acid:

EIQHVCLYEIGWCSMIEMNF

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

71.6

40.9

Major BPS

74.6

0.61

1.4

34.5

Major PPT

76.5

0.6

0.8

73.9

35.8

Minor 5ss

39.7

-1.2

2.8

50.2

Minor BPS

49.5

0.04

2.2

69.62

46.9

Associated Gene:

Gene:

TTC39C

Ensembl Gene ID:

ENSAPLG00000010437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010880

102806417 - 102844386

37970

ENSAPLT00000030146

102806544 - 102833593

27050