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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102823023_102825984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102823023 - 102825984

Intron Length:

2962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTGT

5'SS Class:

major

3'SS Sequence:

CGTTGCTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GTTTCTTGAAAT

Flanking Amino Acid:

VLSFVKQELSAYIKGGWILR

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

67.5

40.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

73.4

0.53

0.9

70.1

36.5

Minor 5ss

46.2

-0.4

2.8

64.5

46.9

Minor BPS

67.6

0.63

1.5

83.29

37.1

Associated Gene:

Gene:

TTC39C

Ensembl Gene ID:

ENSAPLG00000010437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030146

102806544 - 102833593

27050

ENSAPLT00000010880

102806417 - 102844386

37970