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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102877161_102877243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102877161 - 102877243

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGAAT

U12 Branch Point Sequence:

TTACCGTAAGAA

Flanking Amino Acid:

LQNDLNGINRDDIGDIITSA

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.4

32.4

Major BPS

55.1

0.13

1.4

64.3

39.7

Major PPT

73.3

0.52

69.2

46.1

Minor 5ss

35.9

-1.6

2.7

43.9

43.8

Minor BPS

40.1

-0.7

2.4

55.1

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008948

102861144 - 102899703

38560