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Intron Name: Anas_platyrhynchos_platyrhynchos_2_102888547_102889973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

102888547 - 102889973

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTATCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.74

0.8

77.6

35.8

Minor 5ss

33.5

-1.9

3.2

44.3

43.6

Minor BPS

63.2

0.49

1.6

77.22

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008948

102861144 - 102899703

38560