Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_10296284_10300892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10296284 - 10300892

Intron Length:

4609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

AGGGCAATAATC

Flanking Amino Acid:

LISQTKKKQWCYNCEEEAMY

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

85.4

0.8

77.8

36.7

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

44.6

-0.4

1.9

51.72

39.2

Associated Gene:

Gene:

ZMYND11

Ensembl Gene ID:

ENSAPLG00000015491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016210

10240789 - 10301015

60227