Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103002226_103004925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103002226 - 103004925

Intron Length:

2700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTTAT

5'SS Class:

major

3'SS Sequence:

TATTTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

AATTTCAAAACA

Flanking Amino Acid:

HGANIHDQLYDGASAIFLAA

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.2

80.1

30.7

Major BPS

0.79

0.8

83.7

25.7

Major PPT

78.6

0.64

0.8

77.4

36.6

Minor 5ss

37.8

-1.4

48.3

41.3

Minor BPS

0.06

1.9

67.65

38.4

Associated Gene:

Gene:

ANKRD29

Ensembl Gene ID:

ENSAPLG00000008438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032615

102986985 - 103013989

27005

ENSAPLT00000008757

102978017 - 103013989

35973