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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103025309_103031378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103025309 - 103031378

Intron Length:

6070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

CATGTTGTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TGGTCGCTAACA

Flanking Amino Acid:

LLLLLLSPAQVLPQSCVWYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

40.2

Major BPS

66.8

0.42

1.1

37.7

Major PPT

60.8

0.24

1.1

54.1

45.5

Minor 5ss

28.6

-2.4

35.8

Minor BPS

49.9

-0

2.4

68.9

43.2

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008095

103025231 - 103051010

25780