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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103031502_103032761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103031502 - 103032761

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGTTTTTATT

Flanking Amino Acid:

LPKDGYDLLQELCPGLYFGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.3

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.3

0.57

1.1

76.4

36.6

Minor 5ss

-0.8

58.3

46.6

Minor BPS

58.3

0.34

1.7

78.47

38.5

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008095

103025231 - 103051010

25780

ENSAPLT00000035568

103030423 - 103051010

20588