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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103033632_103034524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103033632 - 103034524

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTGTCTTCATT

Flanking Amino Acid:

QYFIGESFANAMYNACKDVE

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

28.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.6

0.69

0.8

73.5

36.8

Minor 5ss

26.7

-2.7

27.8

37.9

Minor BPS

56.3

0.28

1.9

74.4

43.5

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780