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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103035609_103037321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103035609 - 103037321

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

FMLVFGIWCYRRRHFVSEYT

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780