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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103037399_103037930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103037399 - 103037930

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTTTCTAACA

Flanking Amino Acid:

AFSVNSHRDDGKITCGERLG

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

74.7

41.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

88.1

0.86

0.8

85.4

27.8

Minor 5ss

39.2

-1.2

3.3

55.5

Minor BPS

70.7

0.64

1.6

83.44

30.4

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780