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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103038302_103038705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103038302 - 103038705

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTAATGTTAATT

Flanking Amino Acid:

PPLTKEILHQVLDLQDAIVN

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.3

39.5

Major BPS

84.4

0.85

34.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

37.6

-1.4

3.2

48.7

47.5

Minor BPS

49.8

0.06

2.1

68.64

42.8

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780