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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103038933_103039348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103038933 - 103039348

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTATCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TATTGCTGATTA

Flanking Amino Acid:

DYHTHFLYCVRAPASLNDTS

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.65

0.8

35.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

48.4

-0.1

2.1

65.38

41.2

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780