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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103041664_103042065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103041664 - 103042065

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

GTTATTACAACT

Flanking Amino Acid:

GHIRSWGRLLVDSKISLGIA

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

74.8

0.62

1.1

40.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

48.4

-0

1.8

70.54

40.1

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780