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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103042249_103042974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103042249 - 103042974

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATCTTAAAA

Flanking Amino Acid:

NIFIIVQTLQRDERLEGETL

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.9

0.4

63.8

40.5

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

73.5

0.73

1.4

81.31

33.4

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008095

103025231 - 103051010

25780

ENSAPLT00000035568

103030423 - 103051010

20588