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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103043090_103043637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103043090 - 103043637

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCACTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

ACTTGATTAACA

Flanking Amino Acid:

SFSETVAFFLGTLSTMPAVR

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

0.62

65.3

41.5

Major PPT

80.1

0.68

0.8

77.4

31.1

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

57.5

0.23

70.86

41.2

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780